Ian, I just bumped into a couple of files in my list, that jam the timer right at the beginning of the tracks. It's released only by:
1. moving the mouse over either 'minimize' or 'close' buttons
2. clicking on the position slider (which is jammed too)
3. opening the plugin info dialog
4. switching to another program
I've uploaded an example for you to study into your ftp

.
[update]Now this is a bit weird.. I noticed that all mp3s, that have special characters like 'ä', 'ö' and so on in their ID3 tags' (either v1 or v2) artist field, will produce this timer jamming bug. That's why the Blümchen's song I sent you, does it too. Hope you can fix it

.